Imaging based spatial transcriptomics methods preprocessing and quality control
59:56
YouTubeEMBL's European Bioinformatics Institute EMBL-EBI
Imaging based spatial transcriptomics methods preprocessing and quality control
In this webinar, we will give an overview of imaging-based spatial transcriptomics (IST) technologies and discuss how preprocessing can affect downstream analysis results. Using our recently developed QC package (Huber group, EMBL), we will demonstrate a workflow for evaluating segmentation quality and identifying transcript assignment errors ...
406 views4 months ago
Spatial Analysis Methods
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